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MAISI mask autoencoder #1977

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@wachinger

Hi,

Thanks for your great work with MAISI. The mask_generation_autoencoder has 8 input channels. What is the kind of data that is required as input?
Would you have an example on how to use the mask autoencoder alone, without the diffusion part based on the provided data description for mask_pseudo_label*.nii.gz ?

"mask_generation_autoencoder_def": {
    "_target_": "monai.apps.generation.maisi.networks.autoencoderkl_maisi.AutoencoderKlMaisi",
    "spatial_dims": "@spatial_dims",
    "in_channels": 8,
    "out_channels": 125,

Thanks,
Christian

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  1. Can-Zhao commented on Aug 14, 2025

    @Can-Zhao
    Contributor

    @guopengf Hi Pengfei, could you help answer this question? Thank you!

  2. guopengf commented on Aug 18, 2025

    @guopengf
    Contributor

    Hi @wachinger, you can use this function ldm_conditional_sample_one_mask to use the mask generation model alone. We will create a new tutorial on how to use a standalone mask generation diffusion model.

  3. mar-cry commented on Sep 9, 2025

    @mar-cry

    Hi @guopengf , i am also interested in the in_channels of the mask autoencoder, what is the data type of this input ?

  4. guopengf commented on Sep 9, 2025

    @guopengf
    Contributor

    Please refer to the discussion here #2026 (comment)

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