Long RNA-seq analysis workflow
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Oct 13, 2025 - Python
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gencode
Here are 11 public repositories matching this topic...
A lightweight tool for detecting and querying NVIDIA GPU architectures (SM/CC), and generating `-gencode` flags for CUDA builds
cuda nvidia cuda-toolkit nvidia-cuda gencode nvidia-architecture nvidia-gpu ptx ctk compile-flags cuda-compute
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Oct 16, 2026 - Python
Transcript-unit architecture database for disease-associated large-fragment genome-writing target review.
database clinvar mane genome-editing gencode disease-genomics large-fragment-insertion transcript-architecture genome-writing
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Jul 28, 2026 - Python
A webtool for visualizing alternative RNA isoforms across integrated long-read RNA-seq and pseudobulked single-cell short-read RNA-seq data.
bioinformatics data-visualization alternative-splicing data-analysis rna splicing-event transcriptomics isoforms gencode single-cell-rna-seq single-cell-analysis splicing-analyses data-visualization-dashboard long-read-sequencing isoform-diversity rna-splicing-analysis short-read-sequencing
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Sep 24, 2026 - Python
Management of References for Yourself
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Aug 14, 2019 - Python
Snakemake workflow to install reference genomes and their supporting files
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Apr 12, 2025 - Python
Agent skill and CLI toolkit for querying, analyzing, and visualizing human RNA expression baselines and cis-eQTL regulatory associations from the GTEx Portal API V2 across 54 tissues into standalone interactive HTML dashboards.
python bioinformatics rna-seq genomics computational-biology gene-expression data-visualization scientific-visualization gtex transcriptomics uberon eqtl gencode cli-tool volcano-plot ai-agent interactive-dashboard tissue-specificity agent-skill human-tissues
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Sep 23, 2026 - Python
Get the latest gene-transcript identifiers using Ensembl, RefSeq, MANE and LRGs models.
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Oct 4, 2023 - Python
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