Create 3d rooms in blender from floorplans.
An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.
cell detection in calcium imaging recordings
Operator Discretization Library https://odl.readthedocs.io/
Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. The name Kaapana comes from the Hawaiian word kaʻāpana, meaning "distributor" or "part".
starfish: unified pipelines for image-based transcriptomics
Differentiable Computational Lithogrpahy Framework
High performance spatial analysis in a web browser and across programming languages and hardware architectures
Automated 3D cell detection in very large images
Deep and Machine Learning for Microscopy
A Python package housing a collection of deep-learning multi-modal data fusion method pipelines! From data loading, to training, to evaluation - fusilli's got you covered 🌸
Differentiable wave optics simulation library built on PyTorch
BIDScoin converts your source-level neuroimaging data to BIDS
Astra: an open-source observatory control software.
A Slicer extension to provide a GUI around pyradiomics
scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images
nii2dcm: NIfTI to DICOM creation with Python
Open and Affordable Quantitative Imaging Platform
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